PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON61987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ARR-B | ||||||||
Protein Properties | Length: 664aa MW: 72673.7 Da PI: 6.1019 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.6 | 1.4e-28 | 207 | 260 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl PON61987.1 207 KPRVVWSVELHQQFVGAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 260 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 39.4 | 1.3e-12 | 209 | 259 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ PON61987.1 209 RVVWSVELHQQFVGAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 259 678***********************************************7 PP | |||||||
3 | Response_reg | 76.4 | 1e-25 | 29 | 137 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l+ y ev+ + +e al+ll+e++ +D+++ D+ mp+mdG++ll+ i e +lp+i+++a + ++ + + + Ga PON61987.1 29 VLVVDDDPTCLMILEKMLRTCLY-EVTKCNRAEHALKLLREHKngFDVVISDVHMPDMDGFKLLECIGLEM-DLPVIMMSADDGKNVVMKGVTHGAC 123 89*********************.***************999999**********************6654.8************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +e+l + PON61987.1 124 DYLIKPVRIEALKN 137 **********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 664 aa Download sequence |
MNLSNGKGSM STSTSGAGVS DQFPVGLRVL VVDDDPTCLM ILEKMLRTCL YEVTKCNRAE 60 HALKLLREHK NGFDVVISDV HMPDMDGFKL LECIGLEMDL PVIMMSADDG KNVVMKGVTH 120 GACDYLIKPV RIEALKNIWQ HVVRKKKNEW REIEQSGSVE EGDRPAKPSE EADYSSSANE 180 GNWKSSKKRK DEEEEGDERD DTSTLKKPRV VWSVELHQQF VGAVNQLGID KAVPKKILEL 240 MNVPGLTREN VASHLQKYRL YLRRLSGQHQ TSLNNSFMSP QEATFGPMTS LNGIDLQTLA 300 VTGQLPAQSL ATLQAAGLGR STAKSGIPFP LVDQRNLFSF ENPKLRFGEG QQQHLNNNKP 360 VNLLHGIPTS MEPKQLTNLH QSVQSLGMNM QANPHGAQNS PLLMQMAQPQ SRGPILNESA 420 GGHVPRLPSS VTQPIVTSGV AGGILGRNGN ADNGRGAGYN PVLQNSSMLN YRLNQTSELP 480 SNSFPLGNPP SISGLTSKGA FPDEVNSEIK GSAGFVPSYD IFNDLNQHKS NDWDLQNVGL 540 TFDASRQSNN LQGSLDLVHQ GFSGSQRSIQ GRNQSNVVKA MFALGDTDHG NSQNITQNLN 600 PLLGDNSIRV KAERIPDVVT ESSFFPEQFG QDDLMSALLK QQEGIAPAEN QFDFDGYSLD 660 NIPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 0.0 | ARR-B family protein |