PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60190.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 502aa MW: 55236.9 Da PI: 5.5647

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.8e-13	357	403	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq PON60190.1 357 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 403 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MGEKFWANVE DKVMVESVVG TEACQFLISL ASDNVLSGFV TPAADLGVQQ GLCQLVEGSN 60 WNYAIFWRVV SSKSGGSALI WGDGHCRNPK GGGAGDKITS EDGNFEGDEK KEQVKKRVLE 120 KLNACFGGSD EDNYASKLDG VSDLEMFYLT SMYYKFQLDS NSGPGESYKS GKAIWAFDAS 180 NCSHHYQSRS FLARVAGFQT VVFVPVTSGV VELGTFKSTP EEQSAVDMVK NIFGVGSSSS 240 SQSTTKAFPK IFGHELSLGS TKSQSVNINF SPKVEDDSAF PSKSFDLQAI GSSNGRSESS 300 EIKLFPQLNQ MNVGGFNAQT RVSGMELPKD DALPQLDERK PRKRGRKPAN GREEPLNHVE 360 AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAITYIT DLQTKIRVME TEKQMVTNKQ 420 QFSVPEIDFQ SRQEDAVVRM SCPLDAHPVS SVIKMLREHQ IVAQESDVST DENDRIVHTL 480 SIQTQGADAE QLKEKLLAAL SN

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MGEKFWANVE DKVMVESVVG TEACQFLISL ASDNVLSGFV TPAADLGVQQ GLCQLVEGSN  60
WNYAIFWRVV SSKSGGSALI WGDGHCRNPK GGGAGDKITS EDGNFEGDEK KEQVKKRVLE  120
KLNACFGGSD EDNYASKLDG VSDLEMFYLT SMYYKFQLDS NSGPGESYKS GKAIWAFDAS  180
NCSHHYQSRS FLARVAGFQT VVFVPVTSGV VELGTFKSTP EEQSAVDMVK NIFGVGSSSS  240
SQSTTKAFPK IFGHELSLGS TKSQSVNINF SPKVEDDSAF PSKSFDLQAI GSSNGRSESS  300
EIKLFPQLNQ MNVGGFNAQT RVSGMELPKD DALPQLDERK PRKRGRKPAN GREEPLNHVE  360
AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAITYIT DLQTKIRVME TEKQMVTNKQ  420
QFSVPEIDFQ SRQEDAVVRM SCPLDAHPVS SVIKMLREHQ IVAQESDVST DENDRIVHTL  480
SIQTQGADAE QLKEKLLAAL SN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	339	347	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-169	bHLH family protein