PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON58097.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 352aa MW: 39451.7 Da PI: 6.9919 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.5 | 2.3e-05 | 190 | 209 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ PON58097.1 190 FSCPVCYKTFNRYNNMQMHM 209 89*****************9 PP | |||||||
2 | zf-C2H2 | 14.5 | 0.0001 | 274 | 296 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ PON58097.1 274 FMCRKCGKAFAVRGDWRTHEKNC 296 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MADYPYSNFF KPNGLFQFNP FHHAPSPSNP NPFPHHRHQT HHNLYFLGNQ TGLSNNPVVV 60 PPQTPSSPPV REALPLLSLS PSNYHNNEEN DDEDDQNDDD IDINIKTSGC GSSSSNSTTV 120 TVALHIGLPS PSAAEMEAVL SGSSSEVTAE KGDHDHHDHD SAGLYPTNTL NKGQYWIPTP 180 SQILIGPTQF SCPVCYKTFN RYNNMQMHMW GHGSQYRKGP ESLRGTQPTG MLRLPCYCCS 240 PGCRNNIDHP RAKPLKDFRT LQTHYKRKHG IKPFMCRKCG KAFAVRGDWR THEKNCGKLW 300 YCICGSDFKH KRSLKDHIKA FGNGHAAYGI DGFDQEDDEP ASEVEQDNDS MQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-134 | C2H2 family protein |