PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON57030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 468aa MW: 51695.3 Da PI: 5.9501 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 6.7e-17 | 61 | 110 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr+++eIrdp + r +lg+f+taeeAa a++ a+++++g PON57030.1 61 RYRGVRRRP-WGRYASEIRDPQ----SkERRWLGTFDTAEEAACAYDCAALAMRG 110 7********.**********93....35999**********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 468 aa Download sequence |
MEEALARLNG SPIQSSEPEP PSHHHIDQPK YTNTKNSKRP LRETDSSAAA GGGGGVGVTR 60 RYRGVRRRPW GRYASEIRDP QSKERRWLGT FDTAEEAACA YDCAALAMRG YKARTNFVYP 120 SLPPHVADNN HIHHHHQLLP PFNYSKQSQP STKSQLTTPM PHQYSSNSWS RFSRFPSPPP 180 LHSHTNADFS GSSLSQKNGN STTTTTTTTT TATGSPMNMH LFHSDINPSS NMVPSSQTLY 240 NQFPLSSSST SSYSSQNTSF PGFPLLNSEI SSNGMTGSSS LSPNITSSTY SLPVIESNSK 300 ATSNTTTQVP DHDLADSFFP KEESDSGLLE DVIQRFYPKF SPSSKNYPDH ESSKSGDYPN 360 SYNPVISSEN MSTTQTGSKN EDMVSFSFEY QSPVNVPLES FNELNNISTV TTASQTVPFG 420 DDDVLAMNFN ELGQDQSMFL DDIFQFPEFV NAFAEQDTKW LNLSSWLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24590.1 | 3e-14 | ERF family protein |