PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON55979.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 401aa    MW: 44829.6 Da    PI: 6.261
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON55979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.83.8e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l+ ++++ G+g +W + ++++g++R++k+c++rw++yl
       PON55979.1 14 KGPWSPEEDAKLKAYIEKNGTGgNWIALPQKVGLTRCGKSCRLRWLNYL 62
                     79*********************************************97 PP

2Myb_DNA-binding37.36.5e-1269111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +++eEd ++  +    G++ W+ Ia+ ++ gRt++++k++w++
       PON55979.1  69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                      569******************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE KNGTGGNWIA LPQKVGLTRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR  120
RKQSNGTRLS LSATNPDLTK DPTGLLEDSE TLSSSALERL QLHMQLQSLQ NPLSFYNNPA  180
LWPKLHPFQQ KMIQSFQSLN ANPNPNPDPS LNPLIMQHNL VTSPNQGHHD HQPAGQGQKD  240
DFYEPSSVNI AVHGGQEEYK KTGNNDSAKI IEGSENCKED AFACGVGVQH SDPDHENGRI  300
HQVSAFQAEL EDILNGDKGA VSFLPQGDYD HDHQMGDEFD CFKEMNNVSK DSFIWWSNEF  360
DAKSSSSNSW DSTSAALDHH QSSIGTHNGI FHDYDQLNYG L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.19e-94MYB family protein