PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON55979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 401aa MW: 44829.6 Da PI: 6.261 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.8 | 3.8e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++++ G+g +W + ++++g++R++k+c++rw++yl PON55979.1 14 KGPWSPEEDAKLKAYIEKNGTGgNWIALPQKVGLTRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 37.3 | 6.5e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ PON55979.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 401 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE KNGTGGNWIA LPQKVGLTRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR 120 RKQSNGTRLS LSATNPDLTK DPTGLLEDSE TLSSSALERL QLHMQLQSLQ NPLSFYNNPA 180 LWPKLHPFQQ KMIQSFQSLN ANPNPNPDPS LNPLIMQHNL VTSPNQGHHD HQPAGQGQKD 240 DFYEPSSVNI AVHGGQEEYK KTGNNDSAKI IEGSENCKED AFACGVGVQH SDPDHENGRI 300 HQVSAFQAEL EDILNGDKGA VSFLPQGDYD HDHQMGDEFD CFKEMNNVSK DSFIWWSNEF 360 DAKSSSSNSW DSTSAALDHH QSSIGTHNGI FHDYDQLNYG L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 9e-94 | MYB family protein |