PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON54959.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 188aa MW: 21315.9 Da PI: 10.037

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON54959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.6	1.1e-32	108	166	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ +v++tYeg H h+ PON54959.1 108 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGIVVTTYEGMHSHT 166 59********************************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MENYLSFLPF SSNSSPPSSS SLSLNTVNNS TLGNNKSNIG FLGLMSEMEI PTSSNVNIIG 60 STTQINNVNN SQSSEIDHQV LKSGKKKGDK KIRKPRYAFQ TRSQVDILDD GYRWRKYGQK 120 AVKNNKFPRS YYRCTHQGCN VKKQVQRLTK DEGIVVTTYE GMHSHTIEKS TDNFEHILSQ 180 MQIYTTSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	1e-57	WRKY family protein