PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON52119.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 625aa MW: 67116.5 Da PI: 6.9573

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON52119.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.5	8.9e-31	364	422	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ PON52119.1 364 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAlGCPVRKQVQRCAEDKTILITTYEGNHNHP 422 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
MDKGWGLTLD SDSLGFFLNK QTQLPAVLDH HHHHMAIKRP IFATGATADQ SARPSSNMFT 60 AVEFNPAARL GRRPEDHAPP PPSDENRVAA AVVDFFADKN RLVNDGDDSK SVPAINVKKE 120 NPHGDATTGP SLDVNTGLHL LTANTGSDQS TVDDGVSTYV EDKLNKTKVA QLQVELQRIN 180 AENQKLREML SHVTNNYSAL QTHLMTVMQQ QQQNHRADTT QQPQNTNDPQ EVKHERQFLD 240 LGPSATAETD DQVSNNSSSD ERTRSATPQN NILETASKDN YVKYNSTIST TSKDVVPFDQ 300 DQSSIGKRIG REESPESESQ GWAPIKVPKL NSGGGSKPIE QSADATMRKA RVSVRARSEA 360 PMITDGCQWR KYGQKMAKGN PCPRAYYRCT MALGCPVRKQ VQRCAEDKTI LITTYEGNHN 420 HPLPPAAMAM ASTTTAAANM LLSGSMSSAD GLMNPNLLAR AILPCSSSMA TISASAPFPT 480 VTLDLTNNPN PLQMLRSQPT QFQVPLGQPQ NFGTPPPGAP QSFPQVFGQA LYNQSKFSGL 540 QLSSQENIAG SSAHQLQLHQ TQQPSLADSV SAATAAITAD PNFTAALAAA ISSIIGGANP 600 NSAAAAANTN SNSNNSNKIS SFPGN

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

MDKGWGLTLD SDSLGFFLNK QTQLPAVLDH HHHHMAIKRP IFATGATADQ SARPSSNMFT  60
AVEFNPAARL GRRPEDHAPP PPSDENRVAA AVVDFFADKN RLVNDGDDSK SVPAINVKKE  120
NPHGDATTGP SLDVNTGLHL LTANTGSDQS TVDDGVSTYV EDKLNKTKVA QLQVELQRIN  180
AENQKLREML SHVTNNYSAL QTHLMTVMQQ QQQNHRADTT QQPQNTNDPQ EVKHERQFLD  240
LGPSATAETD DQVSNNSSSD ERTRSATPQN NILETASKDN YVKYNSTIST TSKDVVPFDQ  300
DQSSIGKRIG REESPESESQ GWAPIKVPKL NSGGGSKPIE QSADATMRKA RVSVRARSEA  360
PMITDGCQWR KYGQKMAKGN PCPRAYYRCT MALGCPVRKQ VQRCAEDKTI LITTYEGNHN  420
HPLPPAAMAM ASTTTAAANM LLSGSMSSAD GLMNPNLLAR AILPCSSSMA TISASAPFPT  480
VTLDLTNNPN PLQMLRSQPT QFQVPLGQPQ NFGTPPPGAP QSFPQVFGQA LYNQSKFSGL  540
QLSSQENIAG SSAHQLQLHQ TQQPSLADSV SAATAAITAD PNFTAALAAA ISSIIGGANP  600
NSAAAAANTN SNSNNSNKIS SFPGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-127	WRKY family protein