PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON50081.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 390aa MW: 43049.5 Da PI: 4.2623 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62 | 1.3e-19 | 134 | 184 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ kl+g PON50081.1 134 KKFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 184 59********.**********82....35*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence |
MMEQSILCPI KCTEHRTVTK KLTRTPSKKS SSSSSSSSSQ QHESISAAPR VVRISVTDPD 60 ATDSSSDEEG EFLSRQRVKR YVHQVNIETS SCKPSLLAAN VRKRPAVEGP TCRRPVKTNP 120 NNTTITASPT NTNKKFRGVR QRPWGKWAAE IRDPARRVRL WLGTYDTAEE AAMVYDNAAI 180 KLRGPDALTN FVTPVPEPEQ EEMTGLASVS GYDSSEESRN LSSPTSVLHF GTHSNDELES 240 EAQKPLQDSE VLSQPLKQEE EDEVVVVGIR EEVQDETKTT NLPDDLGDYL SLDFPPFQDD 300 DFFSFQSPES TTLFDPSFFL DDDGGCAALD EAVAAFPPLP DYIVEEDFSD MFLEPPSSSY 360 DMSCGGGEST CQGDDLFRDI LLGSDPLVVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 3e-62 | ERF family protein |