PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON48981.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | TCP | ||||||||
Protein Properties | Length: 180aa MW: 19802.3 Da PI: 6.5114 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 90 | 5.1e-28 | 43 | 116 | 9 | 83 |
TCP 9 skihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas 83 ++hTk +gR RR+Rl+a caar+F+L++eLG++++++tieWLl+qa p++ + g + s ++ a+ss+s+ + PON48981.1 43 EDRHTKLNGRNRRIRLPAVCAARVFQLTRELGHKTNGQTIEWLLEQAAPSVVAVLGGDVASG-ATIAKSSVSARQ 116 69****************************************************99944443.223344444443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MGSSVKIDHN SEPEVTNHSD NHKSSSKERL KPVRENSSTK AIEDRHTKLN GRNRRIRLPA 60 VCAARVFQLT RELGHKTNGQ TIEWLLEQAA PSVVAVLGGD VASGATIAKS SVSARQPPSL 120 EDPWECEGKV LANKECCGFA RVQTKLEIDH LLMNFDMEVW ANEIAILQTG MAEGEDTDSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 1e-27 | TCP family protein |