PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON48921.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | ERF | ||||||||
Protein Properties | Length: 322aa MW: 35892.5 Da PI: 4.9385 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.9 | 5.8e-19 | 77 | 125 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a+++ ++k++g PON48921.1 77 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 125 9*******.**********954...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MCGGAIIADF IPRNRGRRVT SSDIWPNSPF VKLNNNFFNP DFSQIGHQDT VPIKRSVASS 60 DGGQDEKPFK RPRKNLYRGI RQRPWGKWAA EIRDPRKGVR VWLGTFNTAE EAARAYDREA 120 RKIRGKKAKV NFPNEDDDYS STQARRKQAQ THLGSPIPNA PLYQQPQNTL PKSFELGFGY 180 DLNEIGQLPS NVFNADPVVT SGEEKSGSGS EGAYSSTGLM GSNRNAGDNG DFAQTRVKEE 240 VEPRQEAKVS QEVIEIEEED NEVQKLSEEL MAYENYMKFY QIPYLDGQSA APNTVQESDV 300 GQLWSFDDGD DVPSTGTSAV AV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 3e-34 | ERF family protein |