PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON46251.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 26351.3 Da PI: 4.764 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.9e-17 | 74 | 124 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ + +Wv+e+r+p +k++r++lg++ t+e+Aa+a++ a+ +++g PON46251.1 74 PVYRGVRRRN-NDKWVCELREP---NKKTRIWLGTYPTPEMAARAHDVAAIAFRG 124 68*****887.8*********8...347***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MDFFSQLSDT CHFVLDCNSE YKPDSSPISA DSGFTSGSGG GLRGGSHSDE EVILASSRPK 60 KRAGRRVFKE TRHPVYRGVR RRNNDKWVCE LREPNKKTRI WLGTYPTPEM AARAHDVAAI 120 AFRGKSACLN FADSAWRSPA PASLDAKDIR AAAAEAAEAF RPKECGGTSG SEDRVMEEVE 180 VEVEEEQTVF YMDEEAVLDM PRFLADLAEG LLLPPPTNYL ISDDVDNNAD VSLWNHSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 2e-66 | ERF family protein |