PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66404.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family TCP
Protein Properties Length: 340aa    MW: 37554.3 Da    PI: 11.3113
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP56.89e-181878273
         TCP  2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73
                ++kk + +++h+kv+gR+R +           +L++eL +++ds+tieWLl+qa+p+i+++tg+++++as++
  PKA66404.1 18 PVKKPSAKDRHSKVDGRGRHI-----------QLTRELRHKSDSQTIEWLLRQAEPSIIAATGSCTTPASFS 78
                689****************99...........79******************************99999776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MADTDGGAAA ASRQLLEPVK KPSAKDRHSK VDGRGRHIQL TRELRHKSDS QTIEWLLRQA  60
EPSIIAATGS CTTPASFSTS SPYILRHSPH FSSITDFIKI LTNFDSAWIY TLLTPLGVGL  120
HSRLLQRHRL RLHWLGPRWL CPSHLDPCRL RPSHLGPRRR PSPMLLRCWS FITSLVTTLS  180
FVFTGSVRRC WSFITSLVTA LRSVSLHLLD RIFCASPLHS GKAPPHRRRS PGAREGGGGG  240
ALAAGIGPLG FWAMPGRTEL GQIWSYGAPE TVFPPVGEGS LARLRSYLPH VQGHHKILAS  300
LSGGRRPPLP MEGERRNLTD VSLLGFIDDI WGFSASLRDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08330.11e-28TCP family protein