PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66017.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 283aa MW: 31939.3 Da PI: 7.9439

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.6	4.3e-52	11	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGfrFhP+d+elv+eyL++++++++ ++ + ++ +vd++k+ePwdLp+++ + kewyfFs +d+kyatg+r+nrat sgyWkatgkd+++ PKA66017.1 11 LPPGFRFHPRDDELVCEYLRPRASASTaasgiggFRGFPALVDVDLNKCEPWDLPEAACIKGKEWYFFSLKDRKYATGHRTNRATVSGYWKATGKDRQI 109 79*******************99996666665555558***********7666789********************************* PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g lvg++ktLvfy+grapkg+ktdWvmhe+r+ PKA66017.1 110 FR-RGVLVGMRKTLVFYQGRAPKGKKTDWVMHEFRM 144 .99*****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MSFLSMVEAN LPPGFRFHPR DDELVCEYLR PRASASTAAS GIGGFRGFPA LVDVDLNKCE 60 PWDLPEAACI KGKEWYFFSL KDRKYATGHR TNRATVSGYW KATGKDRQIF RRGVLVGMRK 120 TLVFYQGRAP KGKKTDWVMH EFRMEVPPSD VTKLSSKQED WVLCRVFFKS RSLSPKLRTE 180 VCEEETSSSS PMVAYEQAPS LVQGLEQVPC FSNFASMADP PQHPPTDGYF PDLSSCLNAF 240 SCDNKVLKAV LSHLAKLENN QMISESCFSE SSIPSDWNHF TSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-80	NAC family protein