PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA65119.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 271aa MW: 29865.2 Da PI: 5.3713 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.4 | 1.3e-16 | 80 | 131 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg+f t eeAa+a+++a++ ++g PKA65119.1 80 SKYRGVARHHHNGRWEARIGRVYG---NKYLYLGTFSTQEEAAQAYDRAALIYRG 131 89****99***********99654...4***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MVRKIENLNF EFGLAGAYDD EEAAARTYDL AALKYWGPST ILNFPASTYA KEYADMHGMS 60 KEDYLTTLRR RSSGFARGAS KYRGVARHHH NGRWEARIGR VYGNKYLYLG TFSTQEEAAQ 120 AYDRAALIYR GSRAVTNFDV SRYTSNPPPL PPPPPPLLRP HALSLPPQPS QPEQNIPSPA 180 TGEIAELSWT MCMDWSFESY PISHLDSDKL LDFSDILDIE HLFEGSETTD GKGNAGAEDS 240 VKIRDAGDRA PGESSSFAAS VAGGFPISIC S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 8e-54 | AP2 family protein |