PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63643.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 335aa    MW: 37597.8 Da    PI: 10.071
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.63.8e-12152197454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h + Er+RR+++ ++f+ Lr llP+       K +Ka++L k+ +Y+ksL
  PKA63643.1 152 HHVISERQRREKLSESFQALRMLLPPG-----SKKDKASVLSKTKDYLKSL 197
                 58899********************95.....599**************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MVQGLLPSAD HQQNWLPTSS ASPQSNIMIN TPAVPETLSP YSLFQHKLPS PQRDDLELAR  60
AMLAVISCTS SSSSSSPSSS SSSRPIYYQN ITAFERYSGS NFSSAIFEGN SGLKGQRMLK  120
KGISFLRKIY SLKLEEASFH RHEARPSSSQ LHHVISERQR REKLSESFQA LRMLLPPGSK  180
KDKASVLSKT KDYLKSLKAQ INDLEERNRR LEMQAQLKDK QVIKFDESTK DQRIDVQVIR  240
ESESTSKSQK INLRVIVRGA VKMIDLSLRI LECLKGMGIS NLVSVESNSI SQQENIYIVT  300
SLILQVQAGS WDDDSLKEAV NRAVQSLVTV EPDRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.15e-47bHLH family protein