PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA60098.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | WOX | ||||||||
Protein Properties | Length: 245aa MW: 27748.2 Da PI: 8.1947 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.2 | 8.9e-21 | 101 | 161 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le lFe+ n +ps+++++ ++++l +++e++V++WFqNrRa+ k+ PKA60098.1 101 RQRWTPTPMQLQILEGLFEQgNGTPSKQKIKGITSELskhgQVSEANVYNWFQNRRARTKR 161 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 99.9 | 1.9e-32 | 100 | 163 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe l+++G tP+k++i+ it+eL+++G+++++NV++WFQNr+aR ++kq PKA60098.1 100 ARQRWTPTPMQLQILEGLFEQGNGTPSKQKIKGITSELSKHGQVSEANVYNWFQNRRARTKRKQ 163 689***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MAWEKGCSSN GKDYYGWSYE EERGRGQWQG LPEGLLCVKV MTDEQMEVLR RQIAVYATIC 60 EQLVEMHRAF SAKQESITGI WSGSIYCDPS SSVGFPKISA RQRWTPTPMQ LQILEGLFEQ 120 GNGTPSKQKI KGITSELSKH GQVSEANVYN WFQNRRARTK RKQASQVQSN TESETEAEVE 180 SPNDVMKKPK LDKEGLHYSN EVARSSGCNE NAVSNPRIKQ MIGKMEIPGY FSHFQNEKGF 240 NFSGL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 155 | 163 | RRARTKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 4e-61 | WOX family protein |