PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA58780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 250aa MW: 28488 Da PI: 8.9412 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.7 | 4.2e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l+++++ +G g +W + +++ g++R++k+c++rw++yl PKA58780.1 14 KGPWSPEEDDKLKQYIETHGIGgNWIALPQKAGLRRCGKSCRLRWLNYL 62 79******************999************************97 PP | |||||||
2 | Myb_DNA-binding | 43.9 | 5.7e-14 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g++++eEd ++ +++ G++ W+ Ia++++ gRt++++k++w++ PKA58780.1 69 GNFSEEEDRIICSLFAAIGSR-WSIIASHLP-GRTDNDIKNYWNT 111 89*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDDKLKQYIE THGIGGNWIA LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGN FSEEEDRIIC SLFAAIGSRW SIIASHLPGR TDNDIKNYWN TKLKKKIFGF 120 SSPSQRKLHH HHHQQQQQQI KHHEQLQLPS NPDSLIETQQ HQHFPSIYPS QHHHCQIKEN 180 YGNLLAFGGS QQKYYSSSTE ISFGGNTEFE PETFGSYSGG ILGGGAPLIK SSVLEGIMQV 240 INTENTIYYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 3e-75 | MYB family protein |