PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53625.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 477aa    MW: 50668.9 Da    PI: 5.1895
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS231.83.2e-711234753374
        GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +lLl++A  v+ gdl+  +a+Larl+ l   p+g p++R++++f+ AL   l++     +      + s ++ ++++a++k+f ++sPi++f+ +taNq
  PKA53625.1 123 DLLLRAASSVECGDLNSSHAILARLNLLlPFPSGGPFNRAVFHFKDALLCFLSNADRPAC----EPPLSASELVRRIASHKAFCDLSPIPQFTSFTANQ 217
                 68*************************9899**********************9333322....2333334699************************* PP

        GRAS 101 aIleavege..ervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                 ++lea++g   + +H iDfd + G QW ++ q+La+R+      pps+R+T+v++   g++ e+   ge+L++f + +gv++  ++    ++    l++
  PKA53625.1 218 TLLEALAGTcgNSLHLIDFDFGLGYQWSSFVQELAARSratrVTPPSIRVTAVVA---GETIETALAGENLRDFGRGIGVRITVEFA---KVGG--LNQ 308
                 ********999************************999666666***********...78999*****************9999983...4554..599 PP

        GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpres..eerikvErel 289
                 +r+  gE++ V l+ +++rl+           +vLk v++  P+vv +v+ e+   ++ sF ++f+  le y+a+++slea++++ +  e+ + +Er++
  PKA53625.1 309 IRLAVGETVGVVLSPAIFRLV------GI---SVLKWVRRAAPRVVAFVDTECVDgGGCSFRRKFAGVLEQYVAIMESLEAGAAEGAgeEAVRRIERAV 398
                 9*******************8......33...69******************7765999***********************999987677789***** PP

        GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 l+++i  +va++ ++        ++Wr+++ + G+ +++lse+++ qa+lllr+ + +g++v  ++gs+vl W++r+L ++SaWr
  PKA53625.1 399 LRPRIFAAVAAAASA--------GEWRDMMAAGGMAAAELSEFTEVQADLLLRRSPTEGFHVARREGSMVLSWRGRELAATSAWR 475
                 ***********9998........89***********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MKIQKTTAGD SAAAISQLPK PLVSPSFLYE PTSVLDPHLT SSPSAAVSVA ASATGGELPV  60
VGGLSCCPSS FAIPAGDDWP EPISWLLSEN PCSDIEYTAS FFSDLSQFPS LPPAPVAPED  120
QADLLLRAAS SVECGDLNSS HAILARLNLL LPFPSGGPFN RAVFHFKDAL LCFLSNADRP  180
ACEPPLSASE LVRRIASHKA FCDLSPIPQF TSFTANQTLL EALAGTCGNS LHLIDFDFGL  240
GYQWSSFVQE LAARSRATRV TPPSIRVTAV VAGETIETAL AGENLRDFGR GIGVRITVEF  300
AKVGGLNQIR LAVGETVGVV LSPAIFRLVG ISVLKWVRRA APRVVAFVDT ECVDGGGCSF  360
RRKFAGVLEQ YVAIMESLEA GAAEGAGEEA VRRIERAVLR PRIFAAVAAA ASAGEWRDMM  420
AAGGMAAAEL SEFTEVQADL LLRRSPTEGF HVARREGSMV LSWRGRELAA TSAWRCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-59GRAS family protein