PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53625.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 477aa MW: 50668.9 Da PI: 5.1895 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 231.8 | 3.2e-71 | 123 | 475 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 +lLl++A v+ gdl+ +a+Larl+ l p+g p++R++++f+ AL l++ + + s ++ ++++a++k+f ++sPi++f+ +taNq PKA53625.1 123 DLLLRAASSVECGDLNSSHAILARLNLLlPFPSGGPFNRAVFHFKDALLCFLSNADRPAC----EPPLSASELVRRIASHKAFCDLSPIPQFTSFTANQ 217 68*************************9899**********************9333322....2333334699************************* PP GRAS 101 aIleavege..ervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193 ++lea++g + +H iDfd + G QW ++ q+La+R+ pps+R+T+v++ g++ e+ ge+L++f + +gv++ ++ ++ l++ PKA53625.1 218 TLLEALAGTcgNSLHLIDFDFGLGYQWSSFVQELAARSratrVTPPSIRVTAVVA---GETIETALAGENLRDFGRGIGVRITVEFA---KVGG--LNQ 308 ********999************************999666666***********...78999*****************9999983...4554..599 PP GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpres..eerikvErel 289 +r+ gE++ V l+ +++rl+ +vLk v++ P+vv +v+ e+ ++ sF ++f+ le y+a+++slea++++ + e+ + +Er++ PKA53625.1 309 IRLAVGETVGVVLSPAIFRLV------GI---SVLKWVRRAAPRVVAFVDTECVDgGGCSFRRKFAGVLEQYVAIMESLEAGAAEGAgeEAVRRIERAV 398 9*******************8......33...69******************7765999***********************999987677789***** PP GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 l+++i +va++ ++ ++Wr+++ + G+ +++lse+++ qa+lllr+ + +g++v ++gs+vl W++r+L ++SaWr PKA53625.1 399 LRPRIFAAVAAAASA--------GEWRDMMAAGGMAAAELSEFTEVQADLLLRRSPTEGFHVARREGSMVLSWRGRELAATSAWR 475 ***********9998........89***********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence |
MKIQKTTAGD SAAAISQLPK PLVSPSFLYE PTSVLDPHLT SSPSAAVSVA ASATGGELPV 60 VGGLSCCPSS FAIPAGDDWP EPISWLLSEN PCSDIEYTAS FFSDLSQFPS LPPAPVAPED 120 QADLLLRAAS SVECGDLNSS HAILARLNLL LPFPSGGPFN RAVFHFKDAL LCFLSNADRP 180 ACEPPLSASE LVRRIASHKA FCDLSPIPQF TSFTANQTLL EALAGTCGNS LHLIDFDFGL 240 GYQWSSFVQE LAARSRATRV TPPSIRVTAV VAGETIETAL AGENLRDFGR GIGVRITVEF 300 AKVGGLNQIR LAVGETVGVV LSPAIFRLVG ISVLKWVRRA APRVVAFVDT ECVDGGGCSF 360 RRKFAGVLEQ YVAIMESLEA GAAEGAGEEA VRRIERAVLR PRIFAAVAAA ASAGEWRDMM 420 AAGGMAAAEL SEFTEVQADL LLRRSPTEGF HVARREGSMV LSWRGRELAA TSAWRCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36710.1 | 1e-59 | GRAS family protein |