PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA52597.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB_related | ||||||||
Protein Properties | Length: 72aa MW: 8273.25 Da PI: 7.5301 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.5 | 4.8e-11 | 25 | 65 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ ++E++l+v+ ++ Gg+ W++Ia +++ gRt++++ +w PKA52597.1 25 KFREDEEDLIVRIYNLIGGR-WSLIAGRIP-GRTAEEIEKYWK 65 5789****************.*********.***********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 72 aa Download sequence |
MNQTSEVVNV GSRASKVNHE EFQAKFREDE EDLIVRIYNL IGGRWSLIAG RIPGRTAEEI 60 EKYWKSKYAN SG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46410.1 | 3e-18 | MYB_related family protein |