PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA48440.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 662aa MW: 71989.3 Da PI: 8.5995

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA48440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	2.9e-09	504	536	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LA+++gL+ +qV++WF N R + PKA48440.1 504 HPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 536 89*****************************88 PP
2	BELL	106.6	1.5e-34	355	423	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e +k+k+kLl ++eeV+ rYkqy++q+q+v+ssFe vagl s +pYtslAlka+S+hFrcLk+ i++q+ PKA48440.1 355 EFEKQKTKLLYMQEEVCSRYKQYHQQMQMVVSSFESVAGLSSVTPYTSLALKAVSKHFRCLKTVISDQL 423 7899**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MGGRPKLQRF ACRTVAFHRP SCDLLLHQNP AHHSHHLLVR FLPPSTSNPF ALIFSNPSSS 60 PSPKSLTIVR THVPSKPMGF FSPNSFAGAG AAATAAMFTP EPHVAQQSRR EKLRVPPSSP 120 GLQQLYDPSP LPLFDFAGDW NVCSEEPYGD LHFSSLAYSP CALHQMVTSS SFDSAEGGPE 180 MGPQLLYGAN EQLLLRRYGG GSSAILTAAS RCSENWNRGG GELAVVAGET QGLSLTLSSN 240 PPPEPDAAHL QGMPASSSAP AAGVGRNAAG PLGPFTGYAA VLKSSKFLKP AQQLLDEFCS 300 VVTKNFDMAG RTLAHSHCDI DWVHVGDRNG SSHSSPEVAG GGSTGGRAGE ICRPEFEKQK 360 TKLLYMQEEV CSRYKQYHQQ MQMVVSSFES VAGLSSVTPY TSLALKAVSK HFRCLKTVIS 420 DQLRHVCNVL GDKLMPSSPS SNKSDNSTLQ KLKHFDPSFR RQKTGRASSL SFSDSSHPVW 480 RPQRGLPESA VSVLRAWLFD HFLHPYPTDT DKHMLATQTG LSRNQVSNWF INARVRLWKP 540 MIEEMHMLET SGRIAGVDLN STRHDDKLAS AAELRCPVTS GKAANGESSH WMEQWHQKKR 600 SRMEDGNIVG EGLMSIGCHG GIHLGGLGAV SLTLGLRQGE GGSQQEQQMR HFQQQILHDF 660 VG

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MGGRPKLQRF ACRTVAFHRP SCDLLLHQNP AHHSHHLLVR FLPPSTSNPF ALIFSNPSSS  60
PSPKSLTIVR THVPSKPMGF FSPNSFAGAG AAATAAMFTP EPHVAQQSRR EKLRVPPSSP  120
GLQQLYDPSP LPLFDFAGDW NVCSEEPYGD LHFSSLAYSP CALHQMVTSS SFDSAEGGPE  180
MGPQLLYGAN EQLLLRRYGG GSSAILTAAS RCSENWNRGG GELAVVAGET QGLSLTLSSN  240
PPPEPDAAHL QGMPASSSAP AAGVGRNAAG PLGPFTGYAA VLKSSKFLKP AQQLLDEFCS  300
VVTKNFDMAG RTLAHSHCDI DWVHVGDRNG SSHSSPEVAG GGSTGGRAGE ICRPEFEKQK  360
TKLLYMQEEV CSRYKQYHQQ MQMVVSSFES VAGLSSVTPY TSLALKAVSK HFRCLKTVIS  420
DQLRHVCNVL GDKLMPSSPS SNKSDNSTLQ KLKHFDPSFR RQKTGRASSL SFSDSSHPVW  480
RPQRGLPESA VSVLRAWLFD HFLHPYPTDT DKHMLATQTG LSRNQVSNWF INARVRLWKP  540
MIEEMHMLET SGRIAGVDLN STRHDDKLAS AAELRCPVTS GKAANGESSH WMEQWHQKKR  600
SRMEDGNIVG EGLMSIGCHG GIHLGGLGAV SLTLGLRQGE GGSQQEQQMR HFQQQILHDF  660
VG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	1e-81	TALE family protein