PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA47790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | TCP | ||||||||
Protein Properties | Length: 220aa MW: 22978 Da PI: 8.1044 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 107.9 | 1.5e-33 | 65 | 134 | 7 | 74 |
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..e 74 ++ ++hTkv+gR+RRvRl+a caar+F+L++eLG+++d++tieWLl qa+pai ++tg++ s++ + PKA47790.1 65 PSRDRHTKVEGRGRRVRLPAVCAARIFQLTRELGHKSDGQTIEWLLHQAEPAILAATGSGISPSPIAilP 134 578********************************************************87777333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MSSASSSQPS DLILYRPTPS LAPSVVPLQP TEPVYDRGCS SSRPKKRVSS EHTCGGAASS 60 SLTMPSRDRH TKVEGRGRRV RLPAVCAARI FQLTRELGHK SDGQTIEWLL HQAEPAILAA 120 TGSGISPSPI AILPPAAAAP STPSPSSPPP PPAAYFQFSG IMDYSAGLGG MGFSPVAAAM 180 AGGGEGGMGF RHVPYYTAML MRPATADEES HTAAELRHED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 6e-32 | TCP family protein |