PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA46102.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 511aa MW: 56027.1 Da PI: 7.7052

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA46102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32.5	1.4e-10	315	352	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gLt +qV++WF N R + PKA46102.1 315 FEHflHPYPTDADKQMLAKQTGLTRNQVSNWFINARVR 352 554459******************************88 PP
2	BELL	88.3	8.1e-29	184	253	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +e q kka+L+sll+eV++rY+ y++q+qtvi sFeav gl++a+pY+ +Alk + +hFr Lk+ai++q+ PKA46102.1 184 EEQQWKKARLISLLNEVCRRYRLYYQQVQTVITSFEAVPGLNTAAPYVCMALKSMWKHFRFLKNAISNQL 253 6899***************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MSSAAGRYVG GGEESVFLPS FHHHETQHGA AFHVPQHSRR EKLRFPAEDP PATAMATSSL 60 PLLYQAASSP CSLSFYSQNP SDGMGMAHLA DGSCSLTQIQ PQQGFSLTLS PPPAAVAVPL 120 GPFTGYSAVL NRSRFLEPAR QLLEEICDLG RAGAGAGAGD PPEMLSIDRE MEGLARVSSS 180 VGAEEQQWKK ARLISLLNEV CRRYRLYYQQ VQTVITSFEA VPGLNTAAPY VCMALKSMWK 240 HFRFLKNAIS NQLHRINKAL GKEGIDGEGI FGFVSSSSCL QEGRNSSSSS RHQHVWRPQR 300 GLPERAVSVL RAWLFEHFLH PYPTDADKQM LAKQTGLTRN QVSNWFINAR VRLWKPMVEE 360 VHNLEMLQVH NDTTHDKGEK QDKLSAASQP SSSTATSSSN PQPQTGRIQR NGVSTSRPLM 420 MNAHHLSCIP HHVEDPYNFV YNDVSGHGSG VSLTLGLHQN TTGSICLSEP LPMNVARRFG 480 LEDCNDSYVI GALEGHVGKD IGGHLLRDFV G

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MSSAAGRYVG GGEESVFLPS FHHHETQHGA AFHVPQHSRR EKLRFPAEDP PATAMATSSL  60
PLLYQAASSP CSLSFYSQNP SDGMGMAHLA DGSCSLTQIQ PQQGFSLTLS PPPAAVAVPL  120
GPFTGYSAVL NRSRFLEPAR QLLEEICDLG RAGAGAGAGD PPEMLSIDRE MEGLARVSSS  180
VGAEEQQWKK ARLISLLNEV CRRYRLYYQQ VQTVITSFEA VPGLNTAAPY VCMALKSMWK  240
HFRFLKNAIS NQLHRINKAL GKEGIDGEGI FGFVSSSSCL QEGRNSSSSS RHQHVWRPQR  300
GLPERAVSVL RAWLFEHFLH PYPTDADKQM LAKQTGLTRN QVSNWFINAR VRLWKPMVEE  360
VHNLEMLQVH NDTTHDKGEK QDKLSAASQP SSSTATSSSN PQPQTGRIQR NGVSTSRPLM  420
MNAHHLSCIP HHVEDPYNFV YNDVSGHGSG VSLTLGLHQN TTGSICLSEP LPMNVARRFG  480
LEDCNDSYVI GALEGHVGKD IGGHLLRDFV G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	4e-78	TALE family protein