PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN26517.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB_related | ||||||||
Protein Properties | Length: 89aa MW: 10653.2 Da PI: 8.0812 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.9 | 3e-10 | 30 | 69 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +T++E++++ + +k+ G + W++Ia +++ gRt++++ +w+ PIN26517.1 30 MTEQEEDIISRMHKLVGDK-WELIAGRVP-GRTAEEIERFWL 69 7****************99.*********.***********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence |
MDKCRQKHPK MQNCFCSQEA NSIEWEFINM TEQEEDIISR MHKLVGDKWE LIAGRVPGRT 60 AEEIERFWLM RNSDVFKGKR IEHKKTPNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46410.1 | 3e-33 | MYB_related family protein |