PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN24153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 251aa MW: 28410.7 Da PI: 5.9614 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.8 | 6.5e-19 | 69 | 117 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg++ taeeAa+a+++ +++++g PIN24153.1 69 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTYNTAEEAARAYDREARRIRG 117 9*******.**********954...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MCGGAIIQGL IPRRRVASGD LCPTSADFWP AAFSSFEQNS TPVKRPRSSS GEECAEKNVA 60 KKKQRKNLYR GIRQRPWGKW AAEIRDPRKG VRVWLGTYNT AEEAARAYDR EARRIRGKKA 120 KVNFPNEEVD YSYNCNPKPG KPYKTEHFNE FNHVELGPAY ENQIYPVNNG GESKPEVNGN 180 VENCKETAVE YETAENEVQK LSEELMAYEN YMKFYQIPYL DGESAAAPAN PPPETVDLWS 240 FDEVSGELSV V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 1e-36 | ERF family protein |