PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN22553.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 25048.3 Da PI: 8.1889 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.9 | 5.7e-14 | 81 | 128 | 3 | 54 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 y GVr +k +gr+ AeIrd + +k+ +lg+f t+eeA +a+i ++++e PIN22553.1 81 YVGVRMRK-SGRFGAEIRDpF----LKKKLWLGTFTTPEEASRAYISKKREFE 128 89*****9.7*********44....25********************999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MKKLTPKTRI VKISYSDPDA TDSSSDELNF NPTCKRSKKI THKIFIQGGK ILENKKHHAF 60 VPQIAPQNIL NPSKKTIKNY YVGVRMRKSG RFGAEIRDPF LKKKLWLGTF TTPEEASRAY 120 ISKKREFEEK RKELRGSGRD LPHSNPFLEN EPSDLYEEKV DSNDVTEVDV KDMVSGDEEA 180 EFGYLNDAQV IDNYGRFVGE FSKIDDMSIP STEDGVFLC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 35 | 78 | KRSKKITHKIFIQGGKILENKKHHAFVPQIAPQNILNPSKKTIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 2e-15 | ERF family protein |