PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21165.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 493aa MW: 53325.1 Da PI: 5.4473

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.6e-30	256	314	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d ++++tYeg+Hnh+ PIN21165.1 256 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCADDRGILITTYEGNHNHP 314 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MDTPPPPPPP TIQFSVNLNC AAPENPNERV IDEMDFFSDK KGDGGGGSGG GGEPTSDDDA 60 TGGANRTVLM SGQSSLLDFN INTSLHLLTA ANSNQSTVDD GISSNSDHRR LENELRIMKT 120 KLEKANLENQ HLREMLKQAT NDYHGLQMQM QTLKQQQQQQ QQEQQNNHQN IEERQNRHEN 180 IVAPRQFMDL GLAVGATDGI VDDPDKEIGR GDDLSPENRV SRVGANSSRS VDQATEATIR 240 KARVSVRARS EASMITDGCQ WRKYGQKMAK GNPCPRAYYR CTMAAGCPVR KQVQRCADDR 300 GILITTYEGN HNHPLPPAAM AMASTTSSAA RMLLSGSMPS TDGIINSNFL ARTLLPCSSS 360 MATISASAPF PTVTLDLTQT PNPLQFPRPP NNFTIPFPNP QQNLDSANNS VAALLPQIFG 420 QALYNQSKFS GLQMSQEMDQ NQLNNPANAL ATDPNVTAAL AAAISSMLGG SFPNNGINNT 480 TNGNNNGNDN NNM

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MDTPPPPPPP TIQFSVNLNC AAPENPNERV IDEMDFFSDK KGDGGGGSGG GGEPTSDDDA  60
TGGANRTVLM SGQSSLLDFN INTSLHLLTA ANSNQSTVDD GISSNSDHRR LENELRIMKT  120
KLEKANLENQ HLREMLKQAT NDYHGLQMQM QTLKQQQQQQ QQEQQNNHQN IEERQNRHEN  180
IVAPRQFMDL GLAVGATDGI VDDPDKEIGR GDDLSPENRV SRVGANSSRS VDQATEATIR  240
KARVSVRARS EASMITDGCQ WRKYGQKMAK GNPCPRAYYR CTMAAGCPVR KQVQRCADDR  300
GILITTYEGN HNHPLPPAAM AMASTTSSAA RMLLSGSMPS TDGIINSNFL ARTLLPCSSS  360
MATISASAPF PTVTLDLTQT PNPLQFPRPP NNFTIPFPNP QQNLDSANNS VAALLPQIFG  420
QALYNQSKFS GLQMSQEMDQ NQLNNPANAL ATDPNVTAAL AAAISSMLGG SFPNNGINNT  480
TNGNNNGNDN NNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-103	WRKY family protein