PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20806.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 312aa    MW: 34830.2 Da    PI: 6.8715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.11.2e-14111161155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++    +Wv+e+r+p   +k+ r +lg+f  +e+Aa a++ a+++l+g
  PIN20806.1 111 PVYRGVRQRN-GEKWVCEVREP---NKKSRLWLGTFPNPEMAAVAHDVAALALRG 161
                 68*****999.8******9998...347*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEPTHLVKRS QLMQFLQQFE LVKKSVIYFC RLNWLICPCL DMVVYVYLAF SSSGSKSNFM  60
NACYGYEDTQ YSSSSASSSS SSSVEVVTTS SSTHYKKKAA GRKKFKETRH PVYRGVRQRN  120
GEKWVCEVRE PNKKSRLWLG TFPNPEMAAV AHDVAALALR GDNAPLNFPD LAQRLPRPVS  180
SSSQDIQRAA LQAAKDFIPA TSSPASSSID LENANRKGQK SSSSTLDISS SSDLFDSKNV  240
ENKMIVEIPS SEAARDNHGD AGFVDEEAIF NMPLLLDSMA EGMLLTPLAM RKGFDWSNEE  300
DHHDIDFTLW RD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.13e-36ERF family protein