PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN20801.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 324aa MW: 36934.1 Da PI: 6.6991 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.2 | 5.7e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l++ ++++G+g +W + +++ g++R++k+c++rw++yl PIN20801.1 14 RGPWSPEEDAKLKEFIEKFGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 37.6 | 5.1e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd ++ + + G++ W+ Ia+ ++ gRt++++k++w++ PIN20801.1 69 GDFSDEEDRIICTLYASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 679******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MGRAPCCDKA SVKRGPWSPE EDAKLKEFIE KFGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGD FSDEEDRIIC TLYASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGI 120 INPSNQPKFS NPFSGTLQPQ DYSPFHFQSA KLISTLQNIS DQFPLPRSQY PYNYQQIQEG 180 LVDLQYYPGK DNNNGMLIFG GNEASCSSSD GSCSQISYGK DHMKQQQEMG CFKGFVSNSA 240 FEENQKYILH YGEYDHHYGD QISAFLDQKP NGFLENTQLE CDLEEVKQVF SSGNGSSNDN 300 NNNSTLWCND ENKTDEKGLY YHWH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 6e-77 | MYB family protein |