PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20761.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 271aa MW: 28864.3 Da PI: 9.1252

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.1	3.2e-38	48	139	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....k 89 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++ +as+ a+s s s++ ss++ + PIN20761.1 48 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTVPASALAAASGSISQQGSSISsglhQ 139 789******************************************************************88877777777776666544430 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MDPKNSKQPQ DMPRFLSPPQ SSATTNLEIK DFQIMTAEKA EPKKQPLAPK RSSNKDRHTK 60 VEGRGRRIRM PALCAARIFQ LTRELGHKSD GETIQWLLQQ AEPSIIAATG TGTVPASALA 120 AASGSISQQG SSISSGLHQK IDDLVVNMSG GRAPWPVIGG NLGRPHVGAT SGLWPSAAAA 180 GPSMGFSGFD MASAGNMGPM SFSSLLGSST QQFPGLELGL SQDGHIGVLS QIYQQMGQAA 240 RVVHQHQYQN QNDHHQHEQP SSKDNSPESG E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	6e-64	TCP family protein