PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19416.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 177aa MW: 20485.1 Da PI: 10.0362

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.4	6.1e-33	98	156	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt +gC+vkk+v+r ++d+ +v++tYeg H+h+ PIN19416.1 98 LDDGYRWRKYGQKAVKNNKFPRSYYRCTNQGCNVKKQVQRLSRDEGIVVTTYEGMHTHP 156 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MDSINPSFFL NQSSGIINPS SSSSFPNMTY NNGNFDGFMG FKRENIQYFP AAEVKNEGFV 60 PVESEIKFSA GIGKKKGNEK KIRKQRFAFQ TRSQVDILDD GYRWRKYGQK AVKNNKFPRS 120 YYRCTNQGCN VKKQVQRLSR DEGIVVTTYE GMHTHPVEKP NDNFEQILNQ MHIYPPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	4e-54	WRKY family protein