PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17602.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 271aa    MW: 30593.5 Da    PI: 8.9664
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.51.5e-181156147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+WT+eEde+l ++v+q+G ++W+ I+r ++ gR++k+c+ rw + 
       PIN17602.1 11 KGPWTPEEDEILQKLVQQHGERNWAWISRSIP-GRSRKSCRMRWCNQ 56
                     79******************************.***********985 PP
2Myb_DNA-binding431e-1365107347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEde++++  ++ G++ W tIa+ ++ gR+++ +k+rw++ 
       PIN17602.1  65 PFTAEEDEIILNKQAEVGNK-WVTIAKLLN-GRSENAVKNRWNSN 107
                      89******************.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MAVCEDSDRI KGPWTPEEDE ILQKLVQQHG ERNWAWISRS IPGRSRKSCR MRWCNQLSPV  60
VDHRPFTAEE DEIILNKQAE VGNKWVTIAK LLNGRSENAV KNRWNSNLKR KFAAVGSGRE  120
ERSAKLLRKA ECVDVSVANG LRSSSESSSQ SESEISGTDH SSFPGALRAE PPAAAVVEEE  180
ISDDEFTALT LRLPGTRRNS AVKKISDNDL LASHRRHREN GETPPPSATA AEEKEKPSIE  240
LELVAVMKKM IRMEVRNYLS ELIRERIRSR K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.13e-55MYB family protein