PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16333.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

AP2

Protein Properties

Length: 405aa MW: 46388.9 Da PI: 8.0526

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.9	3.9e-11	66	122	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ ++++gr++A+++d s+n k+k + g ++ +e Aa+a++ a++k++g PIN16333.1 66 SRFRGVSKHRWTGRYEAHLWDkLSWNVtqKKKGKQ-GAYDDEEAAARAYDLAALKYWG 122 789****************88887784446666.999*************98 PP
2	AP2	29.4	1.9e-09	165	202	1	41
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaee 41 s+y+GV +++ +grW+A+I + g +k+ +lg++ +ee PIN16333.1 165 SRYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNLPEE 202 79**99******99966...3.6*******9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MPMRMIKSEE TFESSFMSLV DTASEEKCIK RRRRDSAAAI LTCTQQQTEN ENVNPKSAAK 60 TVKRSSRFRG VSKHRWTGRY EAHLWDKLSW NVTQKKKGKQ GAYDDEEAAA RAYDLAALKY 120 WGTSTFTNFP ISDYEKEIEI MQTVTKEEYL ASLRRRSSGF SRGVSRYRGV ARHHHNGRWE 180 ARIGRVFGNK YLYLGTYNLP EEYKQISEHF LSDIKVTYLF IGTQEEAARA YDIAAIEYRG 240 INAVTNFDLS NYIRWLKPGA NISVPAQETK QSTDFVAREE SLSPSLKRKA FSADDLQENF 300 ISKLPISQCG RSSPTALGLL LRSSVFRELL EKTSNVSEED SDCENTKNQA HMGRDDECRG 360 IFSERSEDIP FAVSTSGHRI ELQEQLHFDY NCLDMVGTWP PCTSQ

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MPMRMIKSEE TFESSFMSLV DTASEEKCIK RRRRDSAAAI LTCTQQQTEN ENVNPKSAAK  60
TVKRSSRFRG VSKHRWTGRY EAHLWDKLSW NVTQKKKGKQ GAYDDEEAAA RAYDLAALKY  120
WGTSTFTNFP ISDYEKEIEI MQTVTKEEYL ASLRRRSSGF SRGVSRYRGV ARHHHNGRWE  180
ARIGRVFGNK YLYLGTYNLP EEYKQISEHF LSDIKVTYLF IGTQEEAARA YDIAAIEYRG  240
INAVTNFDLS NYIRWLKPGA NISVPAQETK QSTDFVAREE SLSPSLKRKA FSADDLQENF  300
ISKLPISQCG RSSPTALGLL LRSSVFRELL EKTSNVSEED SDCENTKNQA HMGRDDECRG  360
IFSERSEDIP FAVSTSGHRI ELQEQLHFDY NCLDMVGTWP PCTSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-59	AP2 family protein