PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13725.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 257aa MW: 26254.2 Da PI: 7.3634

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13725.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	78.6	1.7e-24	1	86	24	109
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaakskksqksaasaln 109 ++a caar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++ +a ++ +++ + + ss++aa+++++++k++k+aa +++ PIN13725.1 1 MPAACAARIFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVsVNGTLKIPTTPTSSSAAASASETPRKRRKRAA-NSE 86 9*****************************************99999555422222222222222222222222222222222.233 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MPAACAARIF QLTRELGHKS DGETIRWLLE RAEPAIIEAT GTGTVPAIAV SVNGTLKIPT 60 TPTSSSAAAS ASETPRKRRK RAANSEFYDV NDASSFAPVA PIAPQGLVPV FPSGTLFMIP 120 PTAGAAAVAT AGPSNQPQFW AIPATATPVF NVAGRPISNF VSFGGSTVAA ATVSGGDGSG 180 ETEVGPDNNS GNGEKKGTTT MAPSSSSTTS TTTVATGTTS ATQMLRDFSL QIYDKRELQF 240 MVGSSAGNQE QTPSSKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	2e-53	TCP family protein