PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12857.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

CAMTA

Protein Properties

Length: 918aa MW: 104027 Da PI: 6.9638

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	163.9	2.8e-51	30	146	2	117
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 ++e k+rwl+++ei+aiL n++ +++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf rrcy PIN12857.1 30 MEEaKTRWLRPNEIHAILCNHKYFTVNVKPMNLPKSGTVVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVRRCY 128 55669******************************************************************************************** PP CG-1 100 wlLeeelekivlvhylev 117 wlL++++e+ivlvhy+ + PIN12857.1 129 WLLDKSREHIVLVHYRIT 146 *************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 918 aa Download sequence
MESNSVPGRL VGSEIHGFRT MEDLDVGNMM EEAKTRWLRP NEIHAILCNH KYFTVNVKPM 60 NLPKSGTVVL FDRKMLRNFR KDGHNWKKKK DGKTVKEAHE HLKVGNEERI HVYYAHGEDN 120 PTFVRRCYWL LDKSREHIVL VHYRITQELQ GSPTTPVNSN SNSAVSDPSV SWPLSEESDS 180 AVDRAYCGSS VSLSDREGMT IKNHEQRLHE INTLEWDELL APDDSHKLNS PQEGNIAGFE 240 LPNQYTMDSL RIRDNTLSTN KVFPESSTNG FSEQIAGSNP SNYNIPSNLS FQPVGQEMTV 300 NSETTISGLV PMGGVGSLHN LGKDGLNAQD SFGRWMTRII ADSPESVADQ ALESSTLTGH 360 ESFTYPMMDN TRTSPLGQIF NITDVSPAWA LSTEETKILV VGFFNEGHLP CAESRLYFAC 420 GDSILQAEVV QPGVFRCLIL PQKPGLVDLY MTLDGHEPIS QVLAFEFRAP VQPKDEILSE 480 NKSDWKEFQL QMRLARLLFS SSKSLSIYST KLSQTAIKEA KDFDRKSSQI SVGWEFLSEM 540 IEGTKMSYTQ AKNMLFELTL RNKLWEWLLE QVVSGCKVPE RDEQGQGVIH LCAILGYTWA 600 VYPYLWSGLS LDYRDKNGWT ALHWAAFYGR EKMVATLLSA GAKPNLVTDP TSENPGGLNA 660 ADLASKNNYE GLAAYLAEKA LVAQFEDMTL AGNVSGSLQS TTNDTVNPEN FAEEELYLKD 720 TLAAYRTAAD AAARIQAAFR EHSLKVRTIA VESSNPEIEA RNIVAAMKIQ HAFRNYETHK 780 KMAAAARIQY RFRTWKMRKD FVNMRRKAIK IQYRKIVWSV GILEKAILRW RLKRKGFRGL 840 QVQSDTTFKD PNQDSDAEED FFRASRKQAE ERVERSVIKV QAMFRSKRAQ QEYRRMKLEH 900 NKAKLEYEGL LHPDVEMG

Sequence ? help Back to Top

Protein Sequence Length: 918 aa Download sequence

MESNSVPGRL VGSEIHGFRT MEDLDVGNMM EEAKTRWLRP NEIHAILCNH KYFTVNVKPM  60
NLPKSGTVVL FDRKMLRNFR KDGHNWKKKK DGKTVKEAHE HLKVGNEERI HVYYAHGEDN  120
PTFVRRCYWL LDKSREHIVL VHYRITQELQ GSPTTPVNSN SNSAVSDPSV SWPLSEESDS  180
AVDRAYCGSS VSLSDREGMT IKNHEQRLHE INTLEWDELL APDDSHKLNS PQEGNIAGFE  240
LPNQYTMDSL RIRDNTLSTN KVFPESSTNG FSEQIAGSNP SNYNIPSNLS FQPVGQEMTV  300
NSETTISGLV PMGGVGSLHN LGKDGLNAQD SFGRWMTRII ADSPESVADQ ALESSTLTGH  360
ESFTYPMMDN TRTSPLGQIF NITDVSPAWA LSTEETKILV VGFFNEGHLP CAESRLYFAC  420
GDSILQAEVV QPGVFRCLIL PQKPGLVDLY MTLDGHEPIS QVLAFEFRAP VQPKDEILSE  480
NKSDWKEFQL QMRLARLLFS SSKSLSIYST KLSQTAIKEA KDFDRKSSQI SVGWEFLSEM  540
IEGTKMSYTQ AKNMLFELTL RNKLWEWLLE QVVSGCKVPE RDEQGQGVIH LCAILGYTWA  600
VYPYLWSGLS LDYRDKNGWT ALHWAAFYGR EKMVATLLSA GAKPNLVTDP TSENPGGLNA  660
ADLASKNNYE GLAAYLAEKA LVAQFEDMTL AGNVSGSLQS TTNDTVNPEN FAEEELYLKD  720
TLAAYRTAAD AAARIQAAFR EHSLKVRTIA VESSNPEIEA RNIVAAMKIQ HAFRNYETHK  780
KMAAAARIQY RFRTWKMRKD FVNMRRKAIK IQYRKIVWSV GILEKAILRW RLKRKGFRGL  840
QVQSDTTFKD PNQDSDAEED FFRASRKQAE ERVERSVIKV QAMFRSKRAQ QEYRRMKLEH  900
NKAKLEYEGL LHPDVEMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein