PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08797.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

ARR-B

Protein Properties

Length: 665aa MW: 73331.2 Da PI: 6.4396

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.5	7e-29	213	266	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl PIN08797.1 213 KPRVVWSVELHQQFVTAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266 79*****************.******************************8 PP
2	Myb_DNA-binding	41.6	2.9e-13	215	265	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ PIN08797.1 215 RVVWSVELHQQFVTAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 265 678***********************************************7 PP
3	Response_reg	77.7	4.2e-26	33	141	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+q+l+ +y ev+ ++ +e al+ll+e++ +D+++ D+ mp+mdG++ll++ ++lp+i+++a +++ + + + Ga PIN08797.1 33 VLVVDDDPTCLRILEQMLRTCQY-EVTKCSRAEVALKLLRENKdgFDIVISDVHMPDMDGFKLLEQVGLY-MDLPVIMMSADDSKHVVMKGVTHGAC 127 89*******************.***********999999*****************9765.49******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +e+l + PIN08797.1 128 DYLIKPIRMEALKN 141 ********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MNLGVNPRSF TGSSTTWKSG DGVSDQFPAG LRVLVVDDDP TCLRILEQML RTCQYEVTKC 60 SRAEVALKLL RENKDGFDIV ISDVHMPDMD GFKLLEQVGL YMDLPVIMMS ADDSKHVVMK 120 GVTHGACDYL IKPIRMEALK NIWQHVVRKK KHEWKEKDLE QSGSVEEGER QQKPSEDVDY 180 SSSANEGTWK SSKKRKEEEE ETDEKDDTST LKKPRVVWSV ELHQQFVTAV NQLGIDKAVP 240 KKILELMNVP GLTRENVASH LQKYRLYLRR LSGQHQNGVG NSFIGPADAA FGPMTSLNGL 300 DLQALASSGQ LPHQSLATIQ AAALGRATNK SAISVPLADQ RNIFSFESPK IRFVDGHQQH 360 NNSSKQVNLL HGIPTNMDSK QLVALHQSAQ PFGNMNMHVH SQTSQSNSLL TQMVQPQSRN 420 QMLNEVSSSH LLNLPSSMGQ PILARNGLDN VHGPTYTSVS QPSTAVDFSR SQRPELSGNN 480 TFSLVGSSGL TTLASKGMLQ EEFNSEVKGS RGFAPQYDIL NELNQNRTED WGLQNVGSSF 540 QAPHHTNIQG RLDVAPSVLV HPGFSRDQNS GLVRIPSANK AAFSAAEGLG SSTNTGQQLT 600 SSLEDNSLRI KAERLPDMGF QNGLFPDQFG QDDLMSALLK QQHEGAIPVE NEFGYDGYHL 660 DNLPV

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MNLGVNPRSF TGSSTTWKSG DGVSDQFPAG LRVLVVDDDP TCLRILEQML RTCQYEVTKC  60
SRAEVALKLL RENKDGFDIV ISDVHMPDMD GFKLLEQVGL YMDLPVIMMS ADDSKHVVMK  120
GVTHGACDYL IKPIRMEALK NIWQHVVRKK KHEWKEKDLE QSGSVEEGER QQKPSEDVDY  180
SSSANEGTWK SSKKRKEEEE ETDEKDDTST LKKPRVVWSV ELHQQFVTAV NQLGIDKAVP  240
KKILELMNVP GLTRENVASH LQKYRLYLRR LSGQHQNGVG NSFIGPADAA FGPMTSLNGL  300
DLQALASSGQ LPHQSLATIQ AAALGRATNK SAISVPLADQ RNIFSFESPK IRFVDGHQQH  360
NNSSKQVNLL HGIPTNMDSK QLVALHQSAQ PFGNMNMHVH SQTSQSNSLL TQMVQPQSRN  420
QMLNEVSSSH LLNLPSSMGQ PILARNGLDN VHGPTYTSVS QPSTAVDFSR SQRPELSGNN  480
TFSLVGSSGL TTLASKGMLQ EEFNSEVKGS RGFAPQYDIL NELNQNRTED WGLQNVGSSF  540
QAPHHTNIQG RLDVAPSVLV HPGFSRDQNS GLVRIPSANK AAFSAAEGLG SSTNTGQQLT  600
SSLEDNSLRI KAERLPDMGF QNGLFPDQFG QDDLMSALLK QQHEGAIPVE NEFGYDGYHL  660
DNLPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-173	ARR-B family protein