PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07897.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 327aa    MW: 36960 Da    PI: 5.31
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.71.3e-29154212259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++prsYYrC+s  gC ++k+ve+s +dp +++itY+ eH h+
  PIN07897.1 154 SDMWAWRKYGQKPIKGSPYPRSYYRCSSLkGCLARKQVEKSCTDPGIFIITYTAEHSHS 212
                 79*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MAELEDWSLQ AIVRGSSGDY TKVADIDMND DDQNSLFDLS ANYYHDQKFD REFLASFPEI  60
FNVSTGSGDE LEELYKPFYP VPHALPAQAV LDFQEKRPQI DVAEEKQQGH DVSDQLSGSS  120
SVARVTSGYT PKYKKRKNQH KRVVMQVSAE GLSSDMWAWR KYGQKPIKGS PYPRSYYRCS  180
SLKGCLARKQ VEKSCTDPGI FIITYTAEHS HSLPTRRNSL AGTVRQKFPS SKNPNSKIVK  240
QEKADDRKAN TSPKAGAANF NQANIKEENK EENEEVVKGE SHGDEDFMMS DFVFNEDFFS  300
GLEDFNELIS EMPIISPAQQ FPVRSCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-43WRKY family protein