PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06870.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 794aa MW: 91233.7 Da PI: 5.1743

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06870.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.1	4.7e-21	187	270	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ ++++w++++++leHnH + PIN06870.1 187 NYYNCYAKELGFGIRVKSSWTKRNSKEKRGAVLCCNCEGFKTMKEAS-----TRRKETRTGCLAMIRLRLVESNRWRLDEVKLEHNHLF 270 69**************************************98877.....8999*****************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 794 aa Download sequence
MADGAVFSPV AEGLSPNSGI EITMEEGSEN SEEMLDDEGE EDFEIEANDL GGEDNQVLKV 60 KSNDLENAIQ QVLGLERVEL ENEGEEALSI HGANHENHSG LVLQFGSNGH KSNGEQILEI 120 PSNDRGSNSD QMLGILGNDN ENAADADTTV ADADTTVAGA QIDHSRGKSY LSPVEGMEFE 180 SYDDAYNYYN CYAKELGFGI RVKSSWTKRN SKEKRGAVLC CNCEGFKTMK EASTRRKETR 240 TGCLAMIRLR LVESNRWRLD EVKLEHNHLF DHQRAQNSRS HKKMEAGAKR KFESAVDVEV 300 QTIKLYRTTA LDALSYGSSN ERELSNHIEP LKRLNFRNGD VVALHNYFRQ AQLADPNFFY 360 IMDLNDEGYV RNVFWIDSRS RAAYGYFGDV VVVDTRCLSN KHGIPLLSFG GLNQHGQSVF 420 LGCGLLVDET IETYLWLMRA WLTCMLGRPP HTIITDQCKA LRGAISEVFP RAHHRLCLPL 480 VMQSIYEKLG EVRESEIFRT ILTRTVYNSM KIEEFEMAWE EMIQHFDLRD HEWLQSLYED 540 RERWVPVYLK DTLFAGIFTC QPGEYMTSFF HGHLHDQMTW DEFFNMYELL KQKKIQKESL 600 DDHDSRQFTP VLRTTCRYES QVSELYTKEI FLKFQEEVVL MSSCFSVTQI HANGPIITYM 660 VKERDTEGDA SVAKNFEVVY DKVGIEVRCI CSCFNFRGYL CRHALTVLSY NRVEEIPNQY 720 ILTRWRKDVK RLYTPDLGSN NIDISNPLQW YDHLYRRAMQ VVAEGMASQD HHMVAWQVFK 780 ESLNKVRLAT EKPA

Sequence ? help Back to Top

Protein Sequence Length: 794 aa Download sequence

MADGAVFSPV AEGLSPNSGI EITMEEGSEN SEEMLDDEGE EDFEIEANDL GGEDNQVLKV  60
KSNDLENAIQ QVLGLERVEL ENEGEEALSI HGANHENHSG LVLQFGSNGH KSNGEQILEI  120
PSNDRGSNSD QMLGILGNDN ENAADADTTV ADADTTVAGA QIDHSRGKSY LSPVEGMEFE  180
SYDDAYNYYN CYAKELGFGI RVKSSWTKRN SKEKRGAVLC CNCEGFKTMK EASTRRKETR  240
TGCLAMIRLR LVESNRWRLD EVKLEHNHLF DHQRAQNSRS HKKMEAGAKR KFESAVDVEV  300
QTIKLYRTTA LDALSYGSSN ERELSNHIEP LKRLNFRNGD VVALHNYFRQ AQLADPNFFY  360
IMDLNDEGYV RNVFWIDSRS RAAYGYFGDV VVVDTRCLSN KHGIPLLSFG GLNQHGQSVF  420
LGCGLLVDET IETYLWLMRA WLTCMLGRPP HTIITDQCKA LRGAISEVFP RAHHRLCLPL  480
VMQSIYEKLG EVRESEIFRT ILTRTVYNSM KIEEFEMAWE EMIQHFDLRD HEWLQSLYED  540
RERWVPVYLK DTLFAGIFTC QPGEYMTSFF HGHLHDQMTW DEFFNMYELL KQKKIQKESL  600
DDHDSRQFTP VLRTTCRYES QVSELYTKEI FLKFQEEVVL MSSCFSVTQI HANGPIITYM  660
VKERDTEGDA SVAKNFEVVY DKVGIEVRCI CSCFNFRGYL CRHALTVLSY NRVEEIPNQY  720
ILTRWRKDVK RLYTPDLGSN NIDISNPLQW YDHLYRRAMQ VVAEGMASQD HHMVAWQVFK  780
ESLNKVRLAT EKPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	0.0	FAR1 family protein