PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06056.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 267aa    MW: 29873.6 Da    PI: 5.9444
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-19119167355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++GVr+++ +g+W+AeIrdp+    r +r++lg+f tae Aa+a++ a+ +++g
  PIN06056.1 119 FRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAEAAARAYDTAAIEFRG 167
                 8*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MQRSSKRIQR EIRSTGITSM DHRLPPPLPP PQLTSEQEDS VIVIALRNVI TGNEDQNFNI  60
FSHLGGGDDS LGILSLSEDM ETCRFCQIQG CLGCNFFEEK QINNGIKAAP LKKRKKKNFR  120
GVRQRPWGKW AAEIRDPRRA ARVWLGTFET AEAAARAYDT AAIEFRGARA KLNFPFSDYM  180
TAPPPPPPPP SSSFRVRENV SANLKEPQTK KEEGNEGIFE IGSKSNANNE KDWEMIIGGD  240
EIEDWISMMD FNGDPSDSAN GGNFQII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112116KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.16e-30ERF family protein