PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03751.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WOX

Protein Properties

Length: 354aa MW: 39948.4 Da PI: 6.6498

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.4	4.4e-22	78	137	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ PIN03751.1 78 SRWNPTPEQLQTLEELYRRgTRTPSAEQIQHITSQLrrygKIEGKNVFYWFQNHKARERQ 137 7***************99************************************97 PP
2	Wus_type_Homeobox	114.8	4.1e-37	77	139	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+it++L++yGkie+kNVfyWFQN+kaRerqk+ PIN03751.1 77 SSRWNPTPEQLQTLEELYRRGTRTPSAEQIQHITSQLRRYGKIEGKNVFYWFQNHKARERQKR 139 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MMWTMGYNDA GEFNSIQDPF SSRKLRPLVP RPATIAAAAS PPCLTRIHGT DLLALNHHLA 60 MAEQNKKEIN AQQVVVSSRW NPTPEQLQTL EELYRRGTRT PSAEQIQHIT SQLRRYGKIE 120 GKNVFYWFQN HKARERQKRR RQLESLSDDK NNNNNNNHVE NGEKREPPGA NKTVFEDEQT 180 RNWPSPANSS IIAEKNGAKK TECKLPDGWI QFDDDAELQQ RKTATWQMIH NLSCCSSSSP 240 PTNLVNSSST PAANSTIIPP TTLTPMETKP EDFINIFLGH HINTQNLSHS AGNGRGGGEE 300 AQTLQLFPLR SGGRHCLNYE YGGDEAEEEE EESGAAMNHV TYPFQFIEFL PLKN

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MMWTMGYNDA GEFNSIQDPF SSRKLRPLVP RPATIAAAAS PPCLTRIHGT DLLALNHHLA  60
MAEQNKKEIN AQQVVVSSRW NPTPEQLQTL EELYRRGTRT PSAEQIQHIT SQLRRYGKIE  120
GKNVFYWFQN HKARERQKRR RQLESLSDDK NNNNNNNHVE NGEKREPPGA NKTVFEDEQT  180
RNWPSPANSS IIAEKNGAKK TECKLPDGWI QFDDDAELQQ RKTATWQMIH NLSCCSSSSP  240
PTNLVNSSST PAANSTIIPP TTLTPMETKP EDFINIFLGH HINTQNLSHS AGNGRGGGEE  300
AQTLQLFPLR SGGRHCLNYE YGGDEAEEEE EESGAAMNHV TYPFQFIEFL PLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	1e-53	WOX family protein