PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99363.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 388aa MW: 43697.6 Da PI: 7.7104

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.4	6.1e-14	207	251	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++ErrRR+++N++f+ Lr+llP+ K +Ka++L ++eY++sL PIM99363.1 207 HMIAERRRREKLNDSFQVLRSLLPPG-----SKKDKASVLSNTTEYLSSL 251 889*******************95.....599************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MGCARGEIEL GMPNDPRVDL ETEMKNLFPE DFSRQPISRD LPQPSTDPNQ SSSSSLRSLS 60 VDSPPEYSPL LFNIPATSLA TEPTKEPLIG QTFLEEALRS VAPTTLSQIR NTQIPTIESE 120 DAAMTKAILA VLSSPSATSS TPPNLPPISL NPTAFRHYRP ALAPVAARSQ KHNMFKRAVL 180 FFRNLNLRRI REFQIQGNRP TSTQLHHMIA ERRRREKLND SFQVLRSLLP PGSKKDKASV 240 LSNTTEYLSS LKSEVEELRK QNQILESQIL GQKSEGRDQL DQVGESSNSA ERINVEISEV 300 SSSTSEARFF NLRVVIRGEC RVLDLIIRLL EFLKQQRNMG LLSIESSTRM LESIRVHGIM 360 LRLRIEGHEF DESGFLEAVR RIVDDFAH

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MGCARGEIEL GMPNDPRVDL ETEMKNLFPE DFSRQPISRD LPQPSTDPNQ SSSSSLRSLS  60
VDSPPEYSPL LFNIPATSLA TEPTKEPLIG QTFLEEALRS VAPTTLSQIR NTQIPTIESE  120
DAAMTKAILA VLSSPSATSS TPPNLPPISL NPTAFRHYRP ALAPVAARSQ KHNMFKRAVL  180
FFRNLNLRRI REFQIQGNRP TSTQLHHMIA ERRRREKLND SFQVLRSLLP PGSKKDKASV  240
LSNTTEYLSS LKSEVEELRK QNQILESQIL GQKSEGRDQL DQVGESSNSA ERINVEISEV  300
SSSTSEARFF NLRVVIRGEC RVLDLIIRLL EFLKQQRNMG LLSIESSTRM LESIRVHGIM  360
LRLRIEGHEF DESGFLEAVR RIVDDFAH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	211	216	ERRRRE
2	212	217	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	5e-49	bHLH family protein