PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM97868.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 306aa MW: 34524.4 Da PI: 6.973 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.9 | 3.5e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++++++ G+g +W + ++++g++R++k+c++rw++yl PIM97868.1 14 KGPWSPEEDAILKEYIEKNGTGgNWIALPQKVGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 39.3 | 1.5e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd + +++ G++ W+ Ia+ ++ gRt++++k++w++ PIM97868.1 69 GEFSEEEDRMICSLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 78*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDAILKEYIE KNGTGGNWIA LPQKVGLRRC GKSCRLRWLN 60 YLRPNIKHGE FSEEEDRMIC SLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGI 120 AQKNPHQATT YDPLSSNNHF LHSSSIPTAY DFCSNTNSYN TSQDRAFSRV YNREPIIPTF 180 TTLISSNSSG FMSPFDGTYN QLNQDSKNNS CSSSDGSQIT KEMEPDYRLF HGDYQSTYFT 240 NGVNENNQKF LLSGYSSSSS EAAVANGCLS GNPLDYSIEE IKQLMSCNNL NFFVDEIKTE 300 DKLLDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 7e-78 | MYB family protein |