PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29602.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 168aa    MW: 18904.6 Da    PI: 8.1661
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.82e-1184133255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +ykGV+++k  g+WvAe+r+       +   +++g+f t e A   +++   +++g
  PHU29602.1  84 RYKGVSQRK-PGKWVAEVRVlG-----TkDPIWIGTFNTTEVAVYPYDETLIEMKG 133
                 8*******9.9*********66.....349*************9999999999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MGKLTDQIGG SSSILPRPGV LHFSGCDPVK LSTDEEGKAN GKNSEIQEKA CEEEPIVKNE  60
NTEMILIENY LERDLKLPQE KVKRYKGVSQ RKPGKWVAEV RVLGTKDPIW IGTFNTTEVA  120
VYPYDETLIE MKGADTVTNI LKKPPRYTSQ MKINYMNPPS SSIYNARI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-13ERF family protein