PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU29600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 169aa MW: 19485.2 Da PI: 10.2289 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 69.6 | 5.5e-22 | 102 | 152 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++k +grWvAeIrd ++ ++r++lg+f+taeeAa a+++a+ +++g PHU29600.1 102 KKYRGVRQRK-WGRWVAEIRDKRN---NTRHWLGTFDTAEEAAVAYDEAAIEING 152 59*******9.**********533...4***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MASNDEHHQN VAVEKPSKIE RVENSTKEPG KSSVIMPRVV RIYMTDNDAT DSSSDEEEML 60 QGEKSKRPKK LWIKEIMIEN GRTRVISNKK SKEKKLLQVN MKKYRGVRQR KWGRWVAEIR 120 DKRNNTRHWL GTFDTAEEAA VAYDEAAIEI NGANALTNIL EPPLKKINP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 2e-25 | ERF family protein |