PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU29399.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 169aa MW: 19473.2 Da PI: 10.188 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 102 | 152 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++k +grW+AeI+d ++n ++r++lg+f+taeeA a+++ + +++g PHU29399.1 102 KKYRGVRQRK-WGRWAAEIQD-KIN--NTRHWLGTFDTAEEAVVAYDEEAIEING 152 59*******9.**********.345..4********************9999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MASNDEHHQN VTVEKPSKIE RVEKSTKKAG KSSVVMPRVV RIYMTDNDAT DSSSDEEEML 60 QGEKSQRPKK LWIKEIMIEN GRTRVISKKK SKEKKLLQVN MKKYRGVRQR KWGRWAAEIQ 120 DKINNTRHWL GTFDTAEEAV VAYDEEAIEI NGANALTNIL EPPPKKINP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 5e-23 | ERF family protein |