PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU29214.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 420aa MW: 46880.2 Da PI: 6.5093

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU29214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	41.4	3.3e-13	182	212	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++A+Pk+i+e+m+ +gLt+ehv+ HLQkYRl PHU29214.1 182 KEAVPKKIVEIMNEPGLTREHVARHLQKYRL 212 68****************************8 PP
2	Response_reg	21.7	1e-08	20	104	1	84
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE.STTTHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvt.ahgeee 84 +l+v D+ ++ +++ +l+++ y +v ++++ + l+ + e++ ++l+l+ i + +G+++l+ i+++ +lp i+++ + ++ e PHU29214.1 20 ILLVIDDFTIHHIVSDMLDNQTY-QVLHVEKTMDTLNVIWERKsiFNLVLTNIHRLHTNGVDILQIIKNKF-NLPTILMSpGDAKYE 104 79999****************.999999999999999666668**********************99.999999996555533 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MDIQGVGANS SDMGTKNICI LLVIDDFTIH HIVSDMLDNQ TYQVLHVEKT MDTLNVIWER 60 KSIFNLVLTN IHRLHTNGVD ILQIIKNKFN LPTILMSPGD AKYENQVQDC SVAAYVVSFS 120 DTNEMNKFWQ KVLEKEKGRK AAEENNDDEN ASRMPQNVTA DTSRDNTSSA DTDTAIHARD 180 TKEAVPKKIV EIMNEPGLTR EHVARHLQKY RLCLKRAQKS SSASIHDEIL SNDAQEKFSQ 240 VQPYLSSLNF SASRGYSHSM QQPFQTYFQQ GTGGMNGLLD FANSREADHN ALIGQHSAFV 300 PRIAHGSNFR VYGDKRKNML FSIQSGNANQ PTNSNSGLEF IGFRLSTDGK SVNFGQKGLS 360 CALIPNNAYS GLSSSLSEDY IHKQQSSHLE TPIENTLIQS SSVQPENLTF NHPCNSTSEQ

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MDIQGVGANS SDMGTKNICI LLVIDDFTIH HIVSDMLDNQ TYQVLHVEKT MDTLNVIWER  60
KSIFNLVLTN IHRLHTNGVD ILQIIKNKFN LPTILMSPGD AKYENQVQDC SVAAYVVSFS  120
DTNEMNKFWQ KVLEKEKGRK AAEENNDDEN ASRMPQNVTA DTSRDNTSSA DTDTAIHARD  180
TKEAVPKKIV EIMNEPGLTR EHVARHLQKY RLCLKRAQKS SSASIHDEIL SNDAQEKFSQ  240
VQPYLSSLNF SASRGYSHSM QQPFQTYFQQ GTGGMNGLLD FANSREADHN ALIGQHSAFV  300
PRIAHGSNFR VYGDKRKNML FSIQSGNANQ PTNSNSGLEF IGFRLSTDGK SVNFGQKGLS  360
CALIPNNAYS GLSSSLSEDY IHKQQSSHLE TPIENTLIQS SSVQPENLTF NHPCNSTSEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-21	ARR-B family protein