PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22890.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 500aa    MW: 55747.5 Da    PI: 6.8174
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.55.9e-1932121198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ffkv+   d   s+ l++p +fa+  ++   ++++  led+sg++W+v +  ++++g+  +++GW+ F +++gLk gDf+vF++++ + f  vv+++ 
  PHU22890.1  32 FFKVM--IDKRFSKVLYFPPRFARLVSHL--TDQETYLEDSSGQRWRVGI--CNHKGSLAIRQGWRTFSSEHGLKMGDFLVFHYIRGQHF--VVQIYG 121
                 88999..78888889********887655..5568***************..*********************************97888..999876 PP
2B332.21.9e-104034881096
                 HHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3  10 vlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 v  ++ lvlp +  +   g kk + +t+ l+ +++r W v +    + g+ vl+++W+ F+   gLk gD ++F+l++ s++ ++v+v
  PHU22890.1 403 VDGRNFLVLPQSWPQVLsGRKKMGRITIYLKGPDNRPWPVIY--HETFGSKVLAGNWELFAAVYGLKPGDECLFHLSDLSKRMFNVHV 488
                 6677889999999855588889999*****************..999999*************************9765888777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
MVHPHNEACE MCTRTCMLIH GHRDPSPIVS SFFKVMIDKR FSKVLYFPPR FARLVSHLTD  60
QETYLEDSSG QRWRVGICNH KGSLAIRQGW RTFSSEHGLK MGDFLVFHYI RGQHFVVQIY  120
GTSGCEKLNF YNGTFTGKKR PRTNSTATSH DELSPETVIN VRRKSNSTPS DTAVPESERA  180
GHQPVTTTFA SNIDADTGER QIIPQEEGSN DVLQSENGPH NHTDMISQRE SSSVDGAPFE  240
MEFLTLKAPS LDRDITQTEK ISEPVNDISV LGQTDENGHH MGLISSISLK SAENVAKGSH  300
LACLCNKESH CTSNNQVTSE KSNEASQFGK ETRVDMQELK EMATKTHCPP KKLNGKEPKI  360
TEKDGQGYPE SVIVNNMAIK SDPADSGDTS ISDDDSFSCS LQVDGRNFLV LPQSWPQVLS  420
GRKKMGRITI YLKGPDNRPW PVIYHETFGS KVLAGNWELF AAVYGLKPGD ECLFHLSDLS  480
KRMFNVHVAH KVDVTQTTLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.17e-12B3 family protein