PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU18685.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 392aa MW: 42747.5 Da PI: 5.1656

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU18685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	93.3	1.9e-29	210	261	1	52
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 kpr rWtpeLHe Fveav++LGGsekAtPk +l++m+v+gLt++hvkSHLQ PHU18685.1 210 KPRKRWTPELHEVFVEAVSKLGGSEKATPKGVLKIMNVEGLTIYHVKSHLQN 261 79*************************************************6 PP
2	Myb_DNA-binding	50.7	4.1e-16	212	261	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r+rWT+e++e +v+av +lGg t+k + + m+ +g+t +++ks++q+ PHU18685.1 212 RKRWTPELHEVFVEAVSKLGGSekaTPKGVLKIMNvEGLTIYHVKSHLQN 261 89****************99*************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MGVSGATSTS SNLIPSQAIP SASKSRTVGH LLSLTSGPHK DFNFCSTSSQ ESRQHNYPFI 60 SSEASAATCR SSLSSIHSTS FDNCPIGNDS NSSGKDAYHD FINFPTNDPV QNGQVESLAV 120 VMPSDNQAKR SDWQEWADQL INDDDDGGLG SSWNDILVDI SPPEIKFLET SEVLACESHI 180 LPSPAAVVAA ASSGQSYPVG SPSSTTALTK PRKRWTPELH EVFVEAVSKL GGSEKATPKG 240 VLKIMNVEGL TIYHVKSHLQ NCQIRYKPEP SEGTSEKKST SVIEMPSLDL KTTMGITEAL 300 RLQMEAQKQL HEQLEIQRKL QLRIEEQGKY LEMMFERTKD IGKDFKVSSS ITDEHPSPST 360 EPKHSPPNDK SEALEKDPVS LNDRSITGQE SS

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MGVSGATSTS SNLIPSQAIP SASKSRTVGH LLSLTSGPHK DFNFCSTSSQ ESRQHNYPFI  60
SSEASAATCR SSLSSIHSTS FDNCPIGNDS NSSGKDAYHD FINFPTNDPV QNGQVESLAV  120
VMPSDNQAKR SDWQEWADQL INDDDDGGLG SSWNDILVDI SPPEIKFLET SEVLACESHI  180
LPSPAAVVAA ASSGQSYPVG SPSSTTALTK PRKRWTPELH EVFVEAVSKL GGSEKATPKG  240
VLKIMNVEGL TIYHVKSHLQ NCQIRYKPEP SEGTSEKKST SVIEMPSLDL KTTMGITEAL  300
RLQMEAQKQL HEQLEIQRKL QLRIEEQGKY LEMMFERTKD IGKDFKVSSS ITDEHPSPST  360
EPKHSPPNDK SEALEKDPVS LNDRSITGQE SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-76	G2-like family protein