PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16626.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family AP2
Protein Properties Length: 308aa    MW: 34435.1 Da    PI: 5.1717
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16626.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.52.4e-1679130155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  PHU16626.1  79 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 130
                 89****99**********99966...3.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MVDSHGNFNN AVYLGAYDDE GTAAHAYDLA ALKYWGSETI LNFPVSTYEK EIKEMEGQSR  60
EEYIGSLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV FGNKYLYLGT YATQEEAATA  120
YDMAAIEYRG LNAVTNFDLS RYIKWLKPNN NNNNNNNNNN NNQPNPNTES NMIPTPNHNI  180
ESTSTLTTTT TTTCVSATSV YPHLQITSGT TMLDASISQS RPPPATSALG LLLQSTKFKE  240
MMEMTLAAEC PPVPVELPDP GPPQSSSFPE DIKTYFDTQE FGHGHGEDMM FNEINSFMQP  300
LFKFDYDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.36e-63AP2 family protein