PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU16555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | B3 | ||||||||
Protein Properties | Length: 360aa MW: 40203.4 Da PI: 6.3993 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.7 | 9e-18 | 13 | 104 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ffkvl +l + l++p +fa++ ++ ++++ led++gr+W+ ++ +k++gr +++GW eF +++gLk g fvvF+++ s++++ v++f + PHU16555.1 13 FFKVL--IEALCFQVLYIPSTFARSVSHL--TDQETYLEDSNGRRWRARV--CKHDGRLAIKQGWPEFSSEHGLKLGNFVVFRYVP-SSQHFIVQIFGT 104 66666..444444669*********9766..4568***************..*******************************996.555569999976 PP | |||||||
2 | B3 | 35.3 | 2.1e-11 | 280 | 350 | 16 | 87 |
EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 l lp + +++ + +k++ + + l+ ++ r+W+ + ks+ vlt GWk+F + gL+ gD +vF+l+++ PHU16555.1 280 LELPESWPKHFlERSKKGRMIIFLRGPDKRKWTAFY--HSKSCFDVLTYGWKQFTEIYGLNPGDDCVFQLVNQ 350 555555553335445567899***************..99999*9************************9864 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence |
MEACHDEKRV LCFFKVLIEA LCFQVLYIPS TFARSVSHLT DQETYLEDSN GRRWRARVCK 60 HDGRLAIKQG WPEFSSEHGL KLGNFVVFRY VPSSQHFIVQ IFGTSGCEKI RFCSDKGEKV 120 ARAYLEATPP LLQTTSGKAE SEKATDIDAG TGKGKAAICV DESFGMIDRD AQNDQEDGRL 180 CLDLTSFELP ASKPLAQGTS SCDNGKGKRR ASTSPEEIRT SPLGPKDKKF KEASQFDSGE 240 ECANNIEEVI NSEPSDSGGA PSSNADIVSC LVKVDGRDFL ELPESWPKHF LERSKKGRMI 300 IFLRGPDKRK WTAFYHSKSC FDVLTYGWKQ FTEIYGLNPG DDCVFQLVNQ PGCIVDVYKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 2e-09 | B3 family protein |