PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU15847.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 333aa MW: 37417.5 Da PI: 7.7273 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.7 | 8.7e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l++ + ++G+g +W + +++ g++R++k+c++rw++yl PHU15847.1 14 RGPWSPEEDAKLKEFIDKYGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.7 | 2.3e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd ++ + + G++ W+ Ia+ ++ gRt++++k++w++ PHU15847.1 69 GDFSDEEDRIICSLYANIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 679******************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 333 aa Download sequence |
MGRAPCCDKN NVKRGPWSPE EDAKLKEFID KYGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGD FSDEEDRIIC SLYANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGF 120 IHTSSNQRIK SPNLFLPPTT FPPQIQSQAI SNIFKDEYLE PISSLQPNFM YHNNNMNFQL 180 GTNNQYSYFL ESLMNPMQAS CSSSDGSCSQ IPRSNFEETQ KFTLDNYGNN GGTWADHDQK 240 PDGYFGNNHQ NHSSQFQYDT SNIEEVKELI SSSSSNGNGC NNNSNVLFFS DENKANIGAV 300 PALTRGRGFD PEYGENSVGS AATLMGPVKR NPD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G57620.1 | 2e-78 | MYB family protein |